STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1458Phasin protein. (113 aa)    
Predicted Functional Partners:
BVIR_2814
Phasin protein.
  
   
 0.785
BVIR_2950
Hypothetical protein.
  
     0.658
BVIR_3264
50S ribosomal protein L21.
  
   
 0.633
BVIR_1463
Branched-chain amino acid transport protein (AzlD).
 
     0.625
BVIR_2813
Phasin protein.
  
     0.606
BVIR_513
Hypothetical protein.
  
     0.589
BVIR_2797
Hypothetical protein.
  
     0.543
BVIR_1462
AzlC protein.
 
     0.535
BVIR_938
DNA-binding transcriptional regulator AsnC.
  
     0.518
BVIR_1502
Invasion associated locus B (IalB) protein.
  
     0.506
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.