Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_153Methyltransferase domain protein. (260 aa)    
Predicted Functional Partners:
BVIR_686
DNA polymerase III subunit chi.
  
     0.693
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.619
BVIR_151
Hypothetical protein.
       0.604
envZ_1
Osmolarity sensor protein EnvZ.
  
     0.580
BVIR_806
NYN domain protein.
  
     0.579
BVIR_2710
Hypothetical protein.
 
     0.563
BVIR_3197
Hypothetical protein.
  
     0.547
BVIR_1887
Anaerobic benzoate catabolism transcriptional regulator.
  
     0.541
BVIR_132
Putative protoheme IX biogenesis protein.
  
     0.519
BVIR_2377
Hypothetical protein.
  
     0.505
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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