STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sseA3-mercaptopyruvate sulfurtransferase. (282 aa)    
Predicted Functional Partners:
metC_2
Cystathionine beta-lyase MetC.
 
 
 0.973
sir_1
Sulfite reductase [ferredoxin].
    
 0.946
iscS
Cysteine desulfurase.
  
 0.921
nifS
Cysteine desulfurase.
  
 0.921
metC_1
Cystathionine beta-lyase.
 
 
 0.921
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.919
BVIR_2064
Sulfur oxidation protein SoxY.
    
 0.914
BVIR_2063
Sulfur oxidation protein SoxZ.
    
 0.912
BVIR_862
Aspartate aminotransferase.
     
 0.904
mccA
O-acetylserine dependent cystathionine beta-synthase.
  
 
 0.846
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.