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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1591Hypothetical protein. (99 aa)    
Predicted Functional Partners:
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.800
divK
Polar-differentiation response regulator DivK.
       0.615
BVIR_1500
acyl-CoA synthetase.
  
     0.609
BVIR_2797
Hypothetical protein.
  
     0.605
omp2b
Porin omp2b precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.581
BVIR_3043
Putative adhesin RP828 precursor.
  
     0.563
pleD_2
Response regulator PleD.
       0.548
BVIR_2765
Pilus biogenesis CpaD protein (pilus_cpaD).
  
     0.548
BVIR_1005
Flagellar biosynthesis protein, FliO.
  
     0.516
BVIR_1290
MviN-like protein.
  
     0.501
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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