STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_164Hypothetical protein. (226 aa)    
Predicted Functional Partners:
BVIR_166
Cell division ABC transporter subunit FtsX.
     0.869
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.789
lptD_1
LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
    0.749
envZ_1
Osmolarity sensor protein EnvZ.
  
     0.582
BVIR_1471
Hypothetical protein.
  
     0.571
BVIR_165
Hypothetical protein.
       0.553
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.553
BVIR_686
DNA polymerase III subunit chi.
 
     0.536
BVIR_3219
Hypothetical protein.
  
     0.499
ros
Transcriptional regulatory protein MucR.
  
     0.489
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.