Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aidB_1Acyl-CoA dehydrogenase. (577 aa)    
Predicted Functional Partners:
caiD_1
Carnitinyl-CoA dehydratase.
  
 0.952
BVIR_2156
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
 0.925
BVIR_2155
Acryloyl-CoA reductase (NADH).
  
  
 
0.909
etfA_2
Electron transfer flavoprotein subunit alpha.
 
 0.797
livH_4
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
       0.737
livF_3
Glutamine transport ATP-binding protein GlnQ; Belongs to the binding-protein-dependent transport system permease family.
       0.737
livF_4
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
       0.737
etfB_2
Electron transfer flavoprotein subunit beta.
 
 
 0.700
lgrD_1
Carboxylic acid reductase.
  
 0.657
etfA_1
Acryloyl-CoA reductase electron transfer subunit beta.
  
 
 0.621
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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