STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadB2_2Putative 3-hydroxybutyryl-CoA dehydrogenase. (293 aa)    
Predicted Functional Partners:
echA8_3
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.996
phbA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.989
thlA_2
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.986
thlA_1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.982
BVIR_1766
Putative acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.979
scpB_1
Methylmalonyl-CoA decarboxylase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.962
caiD_1
Carnitinyl-CoA dehydratase.
 
 0.961
echA8_1
2,3-dehydroadipyl-CoA hydratase.
 0.944
echA8_2
Putative enoyl-CoA hydratase echA8.
 
 0.936
BVIR_2156
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
0.933
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.