STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1786Light-harvesting protein B-1015 gamma chain; One of the components of the bacteriochlorophyll-protein complex in the chromatophore membrane. (57 aa)    
Predicted Functional Partners:
pufC
Photosynthetic reaction center cytochrome c subunit precursor; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
    
   0.975
pufB
Light-harvesting protein B-1015 beta chain precursor; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
    
   0.900
pufA
Light-harvesting protein B-1015 alpha chain precursor; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
    
   0.900
BVIR_1787
Light-harvesting protein B-1015 gamma chain.
    
  
0.800
puhA
Reaction center protein H chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
    
   0.800
pufL
Reaction center protein L chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
    
   0.800
pufM
Reaction center protein M chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
    
   0.800
phoQ_1
Sensor protein PhoQ.
       0.469
phoP_1
Transcriptional regulatory protein PhoP.
       0.469
BVIR_1785
Hypothetical protein.
       0.469
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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