STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1851Sodium Bile acid symporter family protein. (356 aa)    
Predicted Functional Partners:
arsC_2
Protein ArsC; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.992
arsC_3
Arsenate reductase.
    
 0.935
aseR_2
HTH-type transcriptional repressor AseR.
 
  
 0.669
BVIR_1847
Putative permease.
  
  
 0.623
BVIR_1846
Hypothetical protein.
     
 0.589
aseR_1
HTH-type transcriptional repressor AseR.
  
  
 0.529
BVIR_2604
NADPH-dependent FMN reductase.
     
 0.490
yfkJ
Low molecular weight protein-tyrosine-phosphatase YfkJ.
  
  
 0.467
arsC_1
Arsenate-mycothiol transferase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.467
BVIR_1852
Hypothetical protein.
       0.463
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.