STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmF50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (61 aa)    
Predicted Functional Partners:
rpsP_1
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
 
 0.994
rpmB_1
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
 
 0.994
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
 
 
 0.994
rplL_1
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
  
 
 0.993
rpmC
50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
 
 
 0.993
rplQ
50S ribosomal protein L17.
  
 
 0.993
rpmG_1
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
  
 
 0.993
rplS_1
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
  
 
 0.993
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
 
 0.993
rpmI
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
  
 
 0.993
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.