STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tesAAcyl-CoA thioesterase I precursor. (241 aa)    
Predicted Functional Partners:
BVIR_17
FtsX-like permease family protein.
 
 
   0.962
lolD_2
Putative ABC transporter ATP-binding protein.
 
 
   0.939
ligT
2'-5'-RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
      0.833
hxuA_1
Heme/hemopexin-binding protein precursor.
  
 
 0.593
hxuA_2
Heme/hemopexin-binding protein precursor.
  
 
 0.593
BVIR_2303
Sel1 repeat protein.
  
 
 0.593
BVIR_882
Heme-binding protein A (HasA).
  
 
 0.593
phhB
Putative pterin-4-alpha-carbinolamine dehydratase.
       0.514
tme
NADP-dependent malic enzyme.
 
   
 0.469
BVIR_1725
Phage gp6-like head-tail connector protein.
  
 
 0.464
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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