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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
draGADP-ribosyl-[dinitrogen reductase] glycohydrolase. (299 aa)    
Predicted Functional Partners:
draT
NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase.
 
     0.950
BVIR_1909
Hypothetical protein.
     0.917
ymdB
O-acetyl-ADP-ribose deacetylase.
    
 0.891
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.705
glnK
Nitrogen regulatory protein P-II 2; Belongs to the P(II) protein family.
   
 
 0.705
BVIR_1718
Phage portal protein.
   
 
 0.684
BVIR_2366
Phage portal protein.
   
 
 0.684
cowN
N(2)-fixation sustaining protein CowN; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.
 
     0.573
fdxB
Ferredoxin-3.
  
     0.571
BVIR_2275
NifQ.
 
     0.565
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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