STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldHT_2Aldehyde dehydrogenase, thermostable. (487 aa)    
Predicted Functional Partners:
aldHT_1
Aldehyde dehydrogenase, thermostable.
  
  
 
0.911
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.903
pleC_1
Non-motile and phage-resistance protein.
  
 
 0.715
xecE
2-(S)-hydroxypropyl-CoM dehydrogenase.
 
   0.635
tme
NADP-dependent malic enzyme.
  
  
 0.593
dxs_2
1-deoxy-D-xylulose-5-phosphate synthase.
 
   
 0.583
porB
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.573
bfmBAB
2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.550
spsE
N,N'-diacetyllegionaminic acid synthase.
   
   0.534
gltB_1
Ferredoxin-dependent glutamate synthase 1.
  
  
 0.534
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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