STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xecE2-(S)-hydroxypropyl-CoM dehydrogenase. (271 aa)    
Predicted Functional Partners:
spsE
N,N'-diacetyllegionaminic acid synthase.
 
    0.912
dxs_2
1-deoxy-D-xylulose-5-phosphate synthase.
 
     0.889
BVIR_1971
Capsule polysaccharide biosynthesis protein.
 
    0.845
neuA
CMP-N,N'-diacetyllegionaminic acid synthase.
 
   0.831
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
   0.710
BVIR_1169
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.692
fabG_9
Acetoacetyl-CoA reductase.
  
     0.643
aldHT_2
Aldehyde dehydrogenase, thermostable.
 
   0.635
BVIR_1974
Hypothetical protein.
 
    0.559
lgrD_1
Carboxylic acid reductase.
  
 
 0.550
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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