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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1975Macrocin-O-methyltransferase (TylF). (285 aa)    
Predicted Functional Partners:
BVIR_1747
Macrocin O-methyltransferase.
 
  
 0.718
BVIR_1692
Hypothetical protein.
  
  
 0.601
yhbU_1
Putative protease YhbU precursor.
  
  
 0.601
BVIR_2626
Peptidase family U32.
  
  
 0.601
BVIR_1976
ABC-2 type transporter.
  
    0.489
BVIR_1974
Hypothetical protein.
       0.485
dxs_2
1-deoxy-D-xylulose-5-phosphate synthase.
       0.482
tagH_2
Teichoic acids export ATP-binding protein TagH.
       0.474
tagH_3
Teichoic acids export ATP-binding protein TagH.
       0.474
rsmE
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
   
    0.424
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.