STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1997Cysteine-rich small domain protein. (133 aa)    
Predicted Functional Partners:
BVIR_768
V4R domain protein.
  
     0.706
BVIR_1753
Hypothetical protein.
  
     0.654
BVIR_1472
Dinitrogenase iron-molybdenum cofactor.
  
     0.626
actP_2
Copper-transporting P-type ATPase.
  
     0.624
BVIR_627
Alpha/beta hydrolase family protein.
  
     0.604
ifcA
Fumarate reductase flavoprotein subunit precursor.
  
     0.547
BVIR_1991
Ribosomal protein S12 methylthiotransferase RimO.
 
     0.539
rlp2
Ribulose bisphosphate carboxylase-like protein 2; Belongs to the RuBisCO large chain family.
  
     0.528
BVIR_2800
Hypothetical protein.
  
     0.528
cowN
N(2)-fixation sustaining protein CowN; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.
  
     0.493
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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