Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BVIR_1998Putative GTPase. (327 aa)    
Predicted Functional Partners:
mutB
Methylmalonyl-CoA mutase large subunit.
 0.999
scpA_2
Methylmalonyl-CoA mutase.
 
 0.999
mutA
Methylmalonyl-CoA mutase small subunit.
 
 0.987
BVIR_2634
Putative GTPase.
  
  
 
0.918
BVIR_1336
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
     0.840
BVIR_1999
Hypothetical protein.
       0.757
BVIR_2236
Putative xanthine dehydrogenase subunit A.
 
      0.551
ppdK
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
       0.466
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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