STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepE_2Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)    
Predicted Functional Partners:
mexA_1
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.964
ttgA_2
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.857
bepD
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.824
bepF_3
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.805
bepF_1
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.691
soxR
Redox-sensitive transcriptional activator SoxR.
   
 
 0.633
ttgC_1
Toluene efflux pump outer membrane protein TtgI precursor.
 
 
 0.622
bepF_2
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.609
mexA_2
Multidrug resistance protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.589
cusC
Toluene efflux pump outer membrane protein TtgI precursor.
 
 
 0.560
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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