Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
puuB_34-methylaminobutanoate oxidase (formaldehyde-forming). (447 aa)    
Predicted Functional Partners:
BVIR_2027
Hydrogen cyanide synthase subunit HcnB.
 
 0.927
gcvT
Aminomethyltransferase.
 
 
 0.904
BVIR_2028
Hydrogen cyanide synthase subunit HcnA.
 
    0.797
BVIR_2034
Membrane dipeptidase (Peptidase family M19).
 
    0.786
BVIR_2035
Hypothetical protein.
       0.655
dgdA
2,2-dialkylglycine decarboxylase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.619
puuB_1
Gamma-glutamylputrescine oxidoreductase.
 
   
 0.579
soxB
Sarcosine oxidase subunit beta.
 
    
0.570
livH_5
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
  
    0.460
livJ
Leu/Ile/Val-binding protein precursor.
       0.454
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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