Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2071Hypothetical protein. (386 aa)    
Predicted Functional Partners:
fixP
Cbb3-type cytochrome c oxidase subunit FixP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.874
BVIR_2072
NMT1/THI5 like protein.
  
    0.774
ccpA
Cytochrome c551 peroxidase precursor.
  
 
 0.755
dhbF_1
Dimodular nonribosomal peptide synthase.
  
    0.729
shp
Cytochrome c-type protein SHP precursor.
  
 
 0.720
cycB
Cytochrome c-552 precursor.
  
 
 0.720
entB
Isochorismatase.
  
    0.636
phzD_1
Putative isochorismatase.
   
    0.563
dhbB
Isochorismatase.
   
    0.563
dhbE_1
2,3-dihydroxybenzoate-AMP ligase.
  
    0.524
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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