STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hxuA_2Heme/hemopexin-binding protein precursor. (4317 aa)    
Predicted Functional Partners:
fecA_1
Fe(3+) dicitrate transport protein FecA precursor.
 
     0.859
fecI_3
Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.857
BVIR_2095
Fec operon regulator FecR.
 
     0.835
BVIR_1869
POTRA domain, ShlB-type.
 
 
 0.832
tolQ_1
Biopolymer transport protein ExbB.
 
  
 0.798
BVIR_1865
Hypothetical protein.
 
    0.790
BVIR_1866
Hypothetical protein.
 
     0.780
exbD_2
Biopolymer transport protein ExbD.
 
    0.773
BVIR_1872
Ferripyoverdine receptor precursor.
  
     0.734
BVIR_1876
Hypothetical protein.
  
     0.732
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.