Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVIR_1866 | BVIR_1870 | BVIR_1866 | BVIR_1870 | Hypothetical protein. | Fec operon regulator FecR. | 0.752 |
BVIR_1866 | BVIR_1874 | BVIR_1866 | BVIR_1874 | Hypothetical protein. | Fec operon regulator FecR. | 0.725 |
BVIR_1866 | BVIR_2095 | BVIR_1866 | BVIR_2095 | Hypothetical protein. | Fec operon regulator FecR. | 0.744 |
BVIR_1866 | BVIR_884 | BVIR_1866 | BVIR_884 | Hypothetical protein. | Fec operon regulator FecR. | 0.499 |
BVIR_1866 | fecA_1 | BVIR_1866 | BVIR_2097 | Hypothetical protein. | Fe(3+) dicitrate transport protein FecA precursor. | 0.768 |
BVIR_1866 | fecI_2 | BVIR_1866 | BVIR_1875 | Hypothetical protein. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.767 |
BVIR_1866 | fecI_3 | BVIR_1866 | BVIR_2096 | Hypothetical protein. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.790 |
BVIR_1866 | hxuA_2 | BVIR_1866 | BVIR_2094 | Hypothetical protein. | Heme/hemopexin-binding protein precursor. | 0.780 |
BVIR_1866 | hxuC_1 | BVIR_1866 | BVIR_883 | Hypothetical protein. | Heme/hemopexin utilization protein C precursor. | 0.602 |
BVIR_1866 | tolQ_1 | BVIR_1866 | BVIR_1868 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.977 |
BVIR_1870 | BVIR_1866 | BVIR_1870 | BVIR_1866 | Fec operon regulator FecR. | Hypothetical protein. | 0.752 |
BVIR_1870 | fecA_1 | BVIR_1870 | BVIR_2097 | Fec operon regulator FecR. | Fe(3+) dicitrate transport protein FecA precursor. | 0.806 |
BVIR_1870 | fecI_2 | BVIR_1870 | BVIR_1875 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.835 |
BVIR_1870 | fecI_3 | BVIR_1870 | BVIR_2096 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.835 |
BVIR_1870 | hxuA_2 | BVIR_1870 | BVIR_2094 | Fec operon regulator FecR. | Heme/hemopexin-binding protein precursor. | 0.693 |
BVIR_1870 | hxuC_1 | BVIR_1870 | BVIR_883 | Fec operon regulator FecR. | Heme/hemopexin utilization protein C precursor. | 0.807 |
BVIR_1870 | tolQ_1 | BVIR_1870 | BVIR_1868 | Fec operon regulator FecR. | Biopolymer transport protein ExbB. | 0.689 |
BVIR_1874 | BVIR_1866 | BVIR_1874 | BVIR_1866 | Fec operon regulator FecR. | Hypothetical protein. | 0.725 |
BVIR_1874 | fecA_1 | BVIR_1874 | BVIR_2097 | Fec operon regulator FecR. | Fe(3+) dicitrate transport protein FecA precursor. | 0.805 |
BVIR_1874 | fecI_2 | BVIR_1874 | BVIR_1875 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.961 |
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