Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bchD | bchI | BVIR_591 | BVIR_590 | Magnesium-chelatase 60 kDa subunit. | Magnesium-chelatase 38 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.998 |
| bchD | cobB_2 | BVIR_591 | BVIR_1703 | Magnesium-chelatase 60 kDa subunit. | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.540 |
| bchD | cobH | BVIR_591 | BVIR_1810 | Magnesium-chelatase 60 kDa subunit. | Precorrin-8X methylmutase. | 0.439 |
| bchD | cobL | BVIR_591 | BVIR_1806 | Magnesium-chelatase 60 kDa subunit. | Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]. | 0.697 |
| bchD | cobN_2 | BVIR_591 | BVIR_2113 | Magnesium-chelatase 60 kDa subunit. | Aerobic cobaltochelatase subunit CobN. | 0.910 |
| bchI | bchD | BVIR_590 | BVIR_591 | Magnesium-chelatase 38 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Magnesium-chelatase 60 kDa subunit. | 0.998 |
| bchI | cobL | BVIR_590 | BVIR_1806 | Magnesium-chelatase 38 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]. | 0.425 |
| bchI | cobN_2 | BVIR_590 | BVIR_2113 | Magnesium-chelatase 38 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Aerobic cobaltochelatase subunit CobN. | 0.868 |
| cobB_2 | bchD | BVIR_1703 | BVIR_591 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Magnesium-chelatase 60 kDa subunit. | 0.540 |
| cobB_2 | cobH | BVIR_1703 | BVIR_1810 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-8X methylmutase. | 0.997 |
| cobB_2 | cobI | BVIR_1703 | BVIR_1809 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.860 |
| cobB_2 | cobJ | BVIR_1703 | BVIR_1808 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-3B C(17)-methyltransferase. | 0.901 |
| cobB_2 | cobL | BVIR_1703 | BVIR_1806 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]. | 0.909 |
| cobB_2 | cobN_2 | BVIR_1703 | BVIR_2113 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Aerobic cobaltochelatase subunit CobN. | 0.976 |
| cobB_2 | cobS-2 | BVIR_1703 | BVIR_93 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Aerobic cobaltochelatase subunit CobS. | 0.900 |
| cobB_2 | cobT | BVIR_1703 | BVIR_94 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Aerobic cobaltochelatase subunit CobT. | 0.900 |
| cobB_2 | yjiA_2 | BVIR_1703 | BVIR_2114 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Putative GTP-binding protein YjiA. | 0.404 |
| cobH | bchD | BVIR_1810 | BVIR_591 | Precorrin-8X methylmutase. | Magnesium-chelatase 60 kDa subunit. | 0.439 |
| cobH | cobB_2 | BVIR_1810 | BVIR_1703 | Precorrin-8X methylmutase. | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.997 |
| cobH | cobI | BVIR_1810 | BVIR_1809 | Precorrin-8X methylmutase. | Precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.981 |
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