STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frc_2Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF; Belongs to the CoA-transferase III family. (414 aa)    
Predicted Functional Partners:
mcl2_1
(3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.903
BVIR_2124
Acyl-CoA dehydrogenase.
 
 0.896
trpD2
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
      0.872
mcl2_2
(3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.752
cynR_1
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
       0.513
BVIR_2156
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.500
dctB
C4-dicarboxylate transport sensor protein DctB.
       0.491
dctD
C4-dicarboxylate transport transcriptional regulatory protein DctD.
       0.491
lgrD_1
Carboxylic acid reductase.
   
 
 0.451
tme
NADP-dependent malic enzyme.
     
 0.420
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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