STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctBC4-dicarboxylate transport sensor protein DctB. (614 aa)    
Predicted Functional Partners:
dctD
C4-dicarboxylate transport transcriptional regulatory protein DctD.
 0.995
pleC_1
Non-motile and phage-resistance protein.
 
 0.960
cynR_1
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
       0.737
BVIR_1012
Blue-light-activated protein.
 
 
0.697
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.638
cheA_1
Chemotaxis protein CheA.
  
 
 0.606
fixJ_1
Transcriptional regulatory protein TdiR.
 
 0.575
ssuA
Putative ABC transporter periplasmic binding protein precursor.
 
     0.560
barA
Signal transduction histidine-protein kinase BarA.
 
0.560
BVIR_733
Blue-light-activated histidine kinase 1.
 
 
 0.554
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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