Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
zntR_1HTH-type transcriptional regulator ZntR. (131 aa)    
Predicted Functional Partners:
BVIR_2156
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
   
 0.682
hmrR_1
HTH-type transcriptional regulator HmrR.
  
     0.658
fadD_2
Long-chain-fatty-acid--CoA ligase.
 
    0.585
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.577
BVIR_2155
Acryloyl-CoA reductase (NADH).
    0.564
rpoB_1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.482
glnA
Glutamine synthetase 1.
  
 
 0.466
puuA_1
Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family.
  
 
 0.466
cbpA
Curved DNA-binding protein.
  
 
 0.451
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.435
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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