Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BVIR_1100 | BVIR_115 | BVIR_1100 | BVIR_115 | Hypothetical protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.511 |
| BVIR_1100 | BVIR_132 | BVIR_1100 | BVIR_132 | Hypothetical protein. | Putative protoheme IX biogenesis protein. | 0.610 |
| BVIR_1100 | BVIR_166 | BVIR_1100 | BVIR_166 | Hypothetical protein. | Cell division ABC transporter subunit FtsX. | 0.451 |
| BVIR_1100 | BVIR_2182 | BVIR_1100 | BVIR_2182 | Hypothetical protein. | Outer membrane protein assembly factor BamE. | 0.671 |
| BVIR_1100 | recO | BVIR_1100 | BVIR_815 | Hypothetical protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.467 |
| BVIR_115 | BVIR_1100 | BVIR_115 | BVIR_1100 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.511 |
| BVIR_115 | BVIR_132 | BVIR_115 | BVIR_132 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative protoheme IX biogenesis protein. | 0.637 |
| BVIR_115 | BVIR_2182 | BVIR_115 | BVIR_2182 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor BamE. | 0.747 |
| BVIR_115 | BVIR_513 | BVIR_115 | BVIR_513 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.453 |
| BVIR_115 | bamA | BVIR_115 | BVIR_2429 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor BamA precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.603 |
| BVIR_115 | comL_1 | BVIR_115 | BVIR_413 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor BamD precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.481 |
| BVIR_115 | lptD_1 | BVIR_115 | BVIR_682 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.784 |
| BVIR_115 | recO | BVIR_115 | BVIR_815 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.449 |
| BVIR_132 | BVIR_1100 | BVIR_132 | BVIR_1100 | Putative protoheme IX biogenesis protein. | Hypothetical protein. | 0.610 |
| BVIR_132 | BVIR_115 | BVIR_132 | BVIR_115 | Putative protoheme IX biogenesis protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.637 |
| BVIR_132 | BVIR_166 | BVIR_132 | BVIR_166 | Putative protoheme IX biogenesis protein. | Cell division ABC transporter subunit FtsX. | 0.568 |
| BVIR_132 | BVIR_2182 | BVIR_132 | BVIR_2182 | Putative protoheme IX biogenesis protein. | Outer membrane protein assembly factor BamE. | 0.725 |
| BVIR_132 | BVIR_3221 | BVIR_132 | BVIR_3221 | Putative protoheme IX biogenesis protein. | Deoxycytidine triphosphate deaminase. | 0.552 |
| BVIR_166 | BVIR_1100 | BVIR_166 | BVIR_1100 | Cell division ABC transporter subunit FtsX. | Hypothetical protein. | 0.451 |
| BVIR_166 | BVIR_132 | BVIR_166 | BVIR_132 | Cell division ABC transporter subunit FtsX. | Putative protoheme IX biogenesis protein. | 0.568 |
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