STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttgA_1Toluene efflux pump periplasmic linker protein TtgD precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (258 aa)    
Predicted Functional Partners:
ybhF_2
Putative ABC transporter ATP-binding protein YbhF.
  
 0.964
ybhS
Inner membrane transport permease YbhS.
 
  
 0.957
yhhJ
Inner membrane transport permease YhhJ.
 
  
 0.819
macB_1
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.802
macB_2
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.798
fadR
Fatty acid metabolism regulator protein.
       0.779
BVIR_2228
Hypothetical protein.
       0.773
bepC_1
Outer membrane efflux protein BepC precursor; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 
 0.644
ybhF_1
Putative ABC transporter ATP-binding protein YbhF.
 
  
 0.643
ttgC_1
Toluene efflux pump outer membrane protein TtgI precursor.
  
 
 0.612
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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