STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2234Nicotine blue oxidoreductase. (281 aa)    
Predicted Functional Partners:
BVIR_2235
Putative xanthine dehydrogenase subunit A.
  
 0.995
BVIR_2236
Putative xanthine dehydrogenase subunit A.
 
  
 0.933
moeA
Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
  0.928
cutM
Carbon monoxide dehydrogenase medium chain.
 
  
 0.889
cutS
Carbon monoxide dehydrogenase small chain.
 
  
 0.873
coxL
Carbon monoxide dehydrogenase large chain.
 
   
 0.857
BVIR_2237
Hypothetical protein.
 
     0.553
BVIR_1356
Hypothetical protein.
 
     0.480
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.