Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BVIR_2275NifQ. (218 aa)    
Predicted Functional Partners:
nifS
Cysteine desulfurase.
 
 0.969
BVIR_2273
Hypothetical protein.
 
    0.954
BVIR_2266
2Fe-2S iron-sulfur cluster binding domain protein.
 
 0.952
fdxB
Ferredoxin-3.
 
    0.951
djlA
DnaJ-like protein DjlA.
  
 0.950
iscS
Cysteine desulfurase.
  
 0.948
BVIR_2272
Dinitrogenase iron-molybdenum cofactor.
 
  
 0.941
nifK_4
Nitrogenase molybdenum-iron protein beta chain.
 
  
 0.935
nifD_5
Nitrogenase molybdenum-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.922
nifW
Nitrogenase-stabilizing/protective protein NifW 2; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.922
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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