STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2276Iron-sulfur cluster insertion protein ErpA; Belongs to the HesB/IscA family. (106 aa)    
Predicted Functional Partners:
nifS
Cysteine desulfurase.
 
  
 0.868
BVIR_2277
NifU-like domain protein.
 
 
 0.841
BVIR_2275
NifQ.
 
  
 0.803
nifW
Nitrogenase-stabilizing/protective protein NifW 2; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.767
leuA_2
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.709
BVIR_2273
Hypothetical protein.
 
  
 0.669
BVIR_1778
NifU-like protein.
  
  
 0.665
djlA
DnaJ-like protein DjlA.
  
 
 0.644
iscS
Cysteine desulfurase.
 
  
 0.633
fdxB
Ferredoxin-3.
 
    0.569
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.