STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifWNitrogenase-stabilizing/protective protein NifW 2; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. (116 aa)    
Predicted Functional Partners:
BVIR_2275
NifQ.
 
  
 0.920
BVIR_2289
FeMo cofactor biosynthesis protein NifB.
 
  
 0.907
BVIR_2272
Dinitrogenase iron-molybdenum cofactor.
 
  
 0.905
BVIR_2273
Hypothetical protein.
 
  
 0.899
BVIR_2286
NifZ domain protein.
 
  
 0.883
nifK_3
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.879
nifD_5
Nitrogenase molybdenum-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.879
BVIR_2277
NifU-like domain protein.
 
   
 0.874
nifK_4
Nitrogenase molybdenum-iron protein beta chain.
 
  
 0.873
fdxB
Ferredoxin-3.
 
  
 0.871
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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