STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pobA_1P-hydroxybenzoate hydroxylase. (394 aa)    
Predicted Functional Partners:
BVIR_1678
4-hydroxybenzoyl-CoA thioesterase.
  
  
  0.921
hcl
3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase.
  
  
 0.729
slyA
Transcriptional regulator SlyA.
  
  
 0.689
xlnD
3-hydroxybenzoate 6-hydroxylase 1.
 
   
 0.636
BVIR_1171
Carboxymuconolactone decarboxylase family protein.
 
   
 0.549
mhqO
Putative ring-cleaving dioxygenase MhqO.
     
 0.519
idi
Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
   
  
 0.514
BVIR_2283
HupE / UreJ protein.
 
     0.509
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
 
 0.463
BVIR_2287
Leucine rich repeat variant.
 
     0.456
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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