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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2323Methylmalonyl-CoA carboxyltransferase 12S subunit. (520 aa)    
Predicted Functional Partners:
accA1_2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.986
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.985
BVIR_2321
Methylmalonyl-CoA carboxyltransferase 1.3S subunit.
 
 0.946
accA1_3
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.919
accC
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.918
BVIR_1336
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
 
 0.871
cfiB
2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.743
BVIR_2322
Hypothetical protein.
       0.723
birA
Bifunctional ligase/repressor BirA.
 
 
 0.702
gcdB_3
Glutaconyl-CoA decarboxylase subunit beta.
 
     0.630
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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