STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cusR_1Transcriptional activator protein CzcR. (226 aa)    
Predicted Functional Partners:
cusS
Sensor kinase CusS.
 
 0.978
cheA_1
Chemotaxis protein CheA.
  
 
 0.870
BVIR_1012
Blue-light-activated protein.
 
 0.826
glnE
Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]
     
 0.822
phoR_2
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.802
divJ
Histidine protein kinase DivJ.
 
 0.735
hoxF
NAD-reducing hydrogenase HoxS subunit alpha.
   
 
 0.711
pleC_3
Non-motile and phage-resistance protein.
 
 0.703
pdhS
Cell-division control histidine kinase PdhS.
 
 
 0.703
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.668
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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