Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
hcpCPutative beta-lactamase HcpC precursor. (358 aa)    
Predicted Functional Partners:
BVIR_235
Thiamine-phosphate synthase.
       0.832
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
 
 0.671
suhB_2
Inositol-1-monophosphatase.
       0.647
cbbX
Stage V sporulation protein K.
  
 0.615
yiaD
Putative lipoprotein YiaD precursor.
 
  
 0.560
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.544
BVIR_232
Hypothetical protein.
       0.456
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.452
gltB_1
Ferredoxin-dependent glutamate synthase 1.
      
 0.402
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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