STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2376Putative peptidoglycan binding domain protein. (278 aa)    
Predicted Functional Partners:
BVIR_2377
Hypothetical protein.
 
     0.824
divJ
Histidine protein kinase DivJ.
       0.800
BVIR_2730
AsmA family protein.
  
     0.754
BVIR_1772
Hypothetical protein.
  
     0.737
BVIR_961
Apolipoprotein A1/A4/E domain protein.
  
     0.707
BVIR_3060
Invasion associated locus B (IalB) protein.
  
     0.695
BVIR_827
Hypothetical protein.
  
     0.694
BVIR_3075
Hypothetical protein.
  
     0.692
BVIR_1502
Invasion associated locus B (IalB) protein.
  
     0.675
BVIR_37
Hypothetical protein.
  
     0.670
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.