STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2504Hypothetical protein. (236 aa)    
Predicted Functional Partners:
mbtH
MbtH-like protein.
  
 
 0.969
lgrD_1
Carboxylic acid reductase.
  
  
 0.871
entB
Isochorismatase.
  
  
 0.826
dhbE_1
2,3-dihydroxybenzoate-AMP ligase.
  
  
 0.826
phzD_1
Putative isochorismatase.
  
  
 0.691
dhbB
Isochorismatase.
  
  
 0.691
dhbC
Isochorismate synthase DhbC.
  
  
 0.642
entC_1
Salicylate biosynthesis isochorismate synthase.
  
  
 0.642
tycC_2
Tyrocidine synthase 3.
  
  
 0.633
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
    0.548
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.