STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupCPutative Ni/Fe-hydrogenase B-type cytochrome subunit. (262 aa)    
Predicted Functional Partners:
hoxK
Uptake hydrogenase small subunit precursor.
 
 0.999
hoxL
Uptake hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.998
hybD
Hydrogenase 2 maturation protease.
  
 0.997
BVIR_2536
Nickel-dependent hydrogenase.
 
 
 0.996
BVIR_2540
Hydrogenase-1 operon protein HyaE; Belongs to the HupG/HyaE family.
 
  
 0.993
BVIR_2539
Hypothetical protein.
 
  
 0.991
hybE
Hydrogenase-2 operon protein HybE.
 
  
 0.966
hypC
Hydrogenase isoenzymes formation protein HypC.
 
  
 0.959
porB
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.899
hypA
Hydrogenase/urease nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.898
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.