Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BVIR_263Disulfide bond formation protein B. (179 aa)    
Predicted Functional Partners:
BVIR_1105
DSBA-like thioredoxin domain protein.
 
 
 0.751
BVIR_215
Hypothetical protein.
  
     0.730
bdbD
Disulfide bond formation protein D precursor.
  
 
 0.708
BVIR_3281
Tim44-like domain protein.
  
     0.674
yidC
Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
    0.595
BVIR_1099
NADH dehydrogenase.
 
     0.571
BVIR_472
Hypothetical protein.
  
     0.564
BVIR_2900
Hypothetical protein.
  
     0.559
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
   
 0.556
BVIR_2182
Outer membrane protein assembly factor BamE.
  
     0.541
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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