STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY_3Chemotaxis protein CheY. (127 aa)    
Predicted Functional Partners:
cheA_1
Chemotaxis protein CheA.
 
0.997
fliN_1
Flagellar motor switch protein FliN.
  
 
  0.933
barA
Signal transduction histidine-protein kinase BarA.
 
 
 0.932
cheA_2
Chemotaxis protein CheA.
  
 0.921
fliN_2
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
  0.914
cheW_1
Chemotaxis protein CheW.
 
  
 0.887
bdlA_1
Biofilm dispersion protein BdlA.
 
 
 0.885
BVIR_2709
Chemotaxis regulator CheZ.
 
    0.882
BVIR_1012
Blue-light-activated protein.
 
 
 0.870
divJ
Histidine protein kinase DivJ.
 
 
 0.866
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.