STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepE_3Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1023 aa)    
Predicted Functional Partners:
ttgA_2
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.996
bepF_3
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.978
mexA_2
Multidrug resistance protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.952
bepC_1
Outer membrane efflux protein BepC precursor; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
 0.941
acrB
Multidrug efflux pump subunit AcrB.
  
  
 
0.915
mexA_1
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.857
bepD
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.820
ttgC_1
Toluene efflux pump outer membrane protein TtgI precursor.
 
 
 0.698
bepF_1
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.682
bepF_2
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.617
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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