STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2762Type IV leader peptidase family protein. (169 aa)    
Predicted Functional Partners:
BVIR_2763
SAF domain protein.
 
  
 0.971
BVIR_2766
Cell division inhibitor MinD.
 
  
 0.950
BVIR_2768
Bacterial type II secretion system protein F domain protein.
 
  
 0.937
xpsD
Type II secretion system protein D precursor; Belongs to the bacterial secretin family.
 
  
 0.928
BVIR_2761
Flp/Fap pilin component.
 
  
 0.927
BVIR_2765
Pilus biogenesis CpaD protein (pilus_cpaD).
 
     0.889
BVIR_2759
TadE-like protein.
 
  
 0.888
BVIR_2769
Bacterial type II secretion system protein F domain protein.
 
   
 0.868
BVIR_2758
TadE-like protein.
 
  
 0.863
BVIR_2770
Cellulose synthase subunit BcsC.
 
   
 0.839
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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