STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potH_1Putrescine transport system permease protein PotH. (306 aa)    
Predicted Functional Partners:
ydcV_1
Inner membrane ABC transporter permease protein YdcV.
  
0.996
potA_2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.982
potF_1
Putrescine-binding periplasmic protein precursor; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
  0.975
ydcV_2
Inner membrane ABC transporter permease protein YdcV.
   
 0.947
potA_1
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
   
 0.792
potA_3
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
   
 0.773
malL
Oligo-1,6-glucosidase.
  
  
 0.669
glgX_2
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.602
cysA_3
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
   
 0.547
cysA_2
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
   
 0.524
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.