STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2800Hypothetical protein. (158 aa)    
Predicted Functional Partners:
ohrR_2
Organic hydroperoxide resistance transcriptional regulator.
 
   
 0.787
porB
Pyruvate-flavodoxin oxidoreductase.
     
 0.569
BVIR_1997
Cysteine-rich small domain protein.
  
     0.528
BVIR_457
Electron transport complex subunit RsxB.
 
   
 0.501
pufA
Light-harvesting protein B-1015 alpha chain precursor; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
  
     0.471
BVIR_10
ISXO2-like transposase domain protein.
  
     0.466
BVIR_768
V4R domain protein.
  
    0.453
thcD
Rhodocoxin reductase.
  
  
 0.451
gltD_1
Glutamate synthase [NADPH] small chain.
     
 0.443
gltB_1
Ferredoxin-dependent glutamate synthase 1.
      
 0.432
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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