STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tycC_4Tyrocidine synthase 3. (3097 aa)    
Predicted Functional Partners:
mbtH
MbtH-like protein.
 
 
 0.965
tycC_2
Tyrocidine synthase 3.
 
 
0.943
BVIR_2839
D-alanine--poly(phosphoribitol) ligase subunit 2.
  
 
 0.900
lgrD_1
Carboxylic acid reductase.
 
0.896
tycC_1
Long-chain-fatty-acid--CoA ligase.
 
 
0.875
BVIR_2841
tRNA(Ile)-lysidine synthase.
   0.844
hemL_1
Beta-phenylalanine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.844
fadK
Putative acyl--CoA ligase YhfT.
 
0.823
tycC_3
Tyrocidine synthase 3.
 
    
0.818
sfp
4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily.
 
 
 0.796
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.