STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcrC_2R-phenyllactate dehydratase beta subunit. (376 aa)    
Predicted Functional Partners:
hgdC_4
R-phenyllactate dehydratase activator.
 
 0.983
BVIR_2848
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
     0.944
hgdC_1
R-phenyllactate dehydratase activator.
 
 0.918
hgdC_3
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
 
 0.892
BVIR_2841
tRNA(Ile)-lysidine synthase.
 
     0.781
tycC_2
Tyrocidine synthase 3.
       0.773
tycC_3
Tyrocidine synthase 3.
       0.773
tycC_4
Tyrocidine synthase 3.
       0.773
tycC_1
Long-chain-fatty-acid--CoA ligase.
  
    0.748
BVIR_2081
2-hydroxyglutaryl-CoA dehydratase, D-component.
  
     0.746
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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