STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otsBTrehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (274 aa)    
Predicted Functional Partners:
otsA_2
Alpha,alpha-trehalose-phosphate synthase [UDP-forming].
 
 0.997
BVIR_2870
Trehalase.
   
 0.976
otsA_1
Trehalose-phosphate synthase.
 
 0.973
treZ
Malto-oligosyltrehalose trehalohydrolase.
  
 0.956
BVIR_719
Phosphotransferase enzyme family protein.
   
    0.895
BVIR_516
RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.778
katE
Catalase C; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.679
pfkB
Putative phosphofructokinase PfkB; Belongs to the carbohydrate kinase PfkB family.
  
    0.621
malP
Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
 
 0.545
BVIR_1005
Flagellar biosynthesis protein, FliO.
   
    0.534
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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