STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otsA_2Alpha,alpha-trehalose-phosphate synthase [UDP-forming]. (451 aa)    
Predicted Functional Partners:
otsB
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.997
gtaB_1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.916
BVIR_2870
Trehalase.
 
   
 0.888
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.828
rfbF
Glucose-1-phosphate cytidylyltransferase.
     
  0.800
rffG
dTDP-glucose 4,6-dehydratase 2.
     
  0.800
glgX_2
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
     
 0.528
katE
Catalase C; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.469
BVIR_2986
Hypothetical protein.
   
    0.455
ohrB_1
Organic hydroperoxide resistance protein OhrB.
   
    0.437
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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