STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2885Hypothetical protein. (261 aa)    
Predicted Functional Partners:
BVIR_1163
ChuX-like family protein.
  
  
 0.693
porB
Pyruvate-flavodoxin oxidoreductase.
    
   0.692
idiA
Iron deficiency-induced protein A precursor.
   
    0.672
BVIR_1289
Vitamin B12-binding protein.
  
    0.626
BVIR_3134
Corrinoid ABC transporter substrate-binding protein.
  
    0.626
tpd
34 kDa membrane antigen precursor.
   
    0.609
efeU
Ferrous iron permease EfeU.
   
    0.564
hxuC_2
Heme/hemopexin utilization protein C precursor.
  
  
 0.551
gltB_1
Ferredoxin-dependent glutamate synthase 1.
     
 0.532
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
       0.481
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.